Common SQL Errors

MySQL Error 3040: ER_BOOST_GEOMETRY_OVERLAY_INVALID_INPUT_EXCEPTION - How to Fix Invalid Geometry Overlay Input

Galaxy Team
August 8, 2025

MySQL throws ER_BOOST_GEOMETRY_OVERLAY_INVALID_INPUT_EXCEPTION (SQLSTATE HY000, error 3040) when a spatial overlay function receives geometries that are invalid or not topologically correct.

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What is MySQL error code 3040 (ER_BOOST_GEOMETRY_OVERLAY_INVALID_INPUT_EXCEPTION)?

ER_BOOST_GEOMETRY_OVERLAY_INVALID_INPUT_EXCEPTION occurs when MySQL spatial functions like ST_Intersection or ST_Union process invalid geometry data. Validate and repair geometries with ST_IsValid and ST_MakeValid, then rerun the query to resolve the error.

Error Highlights

Typical Error Message

ER_BOOST_GEOMETRY_OVERLAY_INVALID_INPUT_EXCEPTION

Error Type

Data Error

Language

MySQL

Symbol

invalid in function %s. ER_BOOST_GEOMETRY_OVERLAY_INVALID_INPUT_EXCEPTION was added in 5.7.5.

Error Code

3040

SQL State

HY000

Explanation

Table of Contents

What is MySQL error 3040 (ER_BOOST_GEOMETRY_OVERLAY_INVALID_INPUT_EXCEPTION)?

MySQL raises error 3040 when the Boost.Geometry engine inside spatial functions cannot compute an overlay because one or more input geometries are invalid. Overlay operations include ST_Intersection, ST_Union, ST_Difference, ST_SymDifference, and ST_Buffer.

The error was introduced in MySQL 5.7.5 when GIS functions were re-implemented on Boost.Geometry. It usually appears during complex spatial joins, geo-analytics, or data migrations that insert external shapefiles.

What Causes This Error?

An overlay calculation fails if any participating geometry violates OGC validity rules such as self-intersection, ring orientation issues, or unclosed polygons.

The error can also surface when coordinate values exceed the allowed range, geometries mix SRIDs without conversion, or when NULL or EMPTY geometries sneak into the function call.

How to Fix ER_BOOST_GEOMETRY_OVERLAY_INVALID_INPUT_EXCEPTION

Validate all geometries before running overlay commands. Use ST_IsValid to detect problems and ST_MakeValid to repair them. Always check SRIDs and cast consistently with ST_Transform or ST_SRID.

For batch repairs, update the column in place or write corrected rows to a new table, then reissue the spatial query.

Common Scenarios and Solutions

Scenario: loading external shapefiles. Solution: run ST_MakeValid on imported records prior to union or intersection.

Scenario: dynamic geometry creation from user input. Solution: add BEFORE INSERT/UPDATE triggers that reject or fix invalid shapes.

Best Practices to Avoid This Error

Enforce validity at ingestion with CHECK (ST_IsValid(geom)) constraints in MySQL 8.0.16+. Store geometries with the same SRID and use spatial indexes to keep data consistent.

Include automated nightly jobs that scan for invalid geometries and repair them to maintain data quality.

How Galaxy Helps

Galaxy’s SQL editor highlights failing GIS statements, offers AI-driven fixes, and lets teams share validated repair scripts in Collections. Version control ensures the same geometry-cleaning query can be reused across projects without copy-paste errors.

Common Causes

Invalid Polygon Rings

Polygons with self-intersections (bow-ties) or unclosed rings break OGC validity rules.

Mismatched SRIDs

Running overlay functions on geometries with different spatial reference IDs can return invalid results and trigger the error.

Coordinate Out of Range

Latitude or longitude values outside -180 to 180 or -90 to 90 cause Boost.Geometry to fail.

NULL or EMPTY Geometries

Passing NULL or EMPTY shapes into overlay functions without filtering leads to calculation errors.

Related Errors

ER_BOOST_GEOMETRY_EMPTY_INPUT_EXCEPTION

Raised when overlay functions receive an empty geometry instead of an invalid one.

ER_GIS_INVALID_DATA

Generic GIS error for malformed WKB or WKT that fails during parsing.

ER_GIS_DIFFERENT_SRIDS

Occurs when spatial operations involve geometries with different SRIDs without transformation.

FAQs

Is this error limited to MySQL 5.7?

No. The error exists in 5.7.5 and all MySQL 8.x versions that use Boost.Geometry.

Can I disable validity checks to bypass the error?

No. Boost.Geometry stops execution when encountering invalid input. Always fix the data instead.

Does spatial indexing affect this error?

Spatial indexes do not trigger the error but may hide it until an overlay function reads the rows. Keep indexes after cleaning data.

How can Galaxy automate geometry repairs?

Store ST_MakeValid scripts in a Galaxy Collection and schedule them via CI to run nightly. Team queries stay accessible and versioned.

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