Top 10 Weka Alternatives for Machine Learning in 2025

Looking for a 2025-ready replacement for Weka? This guide reviews the 10 best machine-learning platforms and libraries, comparing features, pricing, and ideal use cases so teams can pick the right toolkit for prototyping, production, or no-code experimentation.

1
minute read
Alternatives
July 2, 2025
Sign up for the latest notes from our team!
Welcome to the Galaxy, Guardian!
You'll be receiving a confirmation email

Follow us on twitter :)
Oops! Something went wrong while submitting the form.
The best Weka alternatives in 2025 are scikit-learn, TensorFlow, and H2O.ai. scikit-learn excels at fast classical ML; TensorFlow offers scalable deep-learning workflows; H2O.ai is ideal for automated machine-learning and enterprise deployment.

Table of Contents

Machine-learning practitioners have long relied on Weka for its easy-to-use GUI, strong collection of algorithms, and built-in data-prep utilities. But the ML landscape has expanded dramatically, and many teams now need cloud scalability, deep-learning support, no-code automation, or tighter programming-language integration than Weka offers. If you are evaluating replacements in 2025, the following guide walks through the 10 strongest alternatives, ranked by feature depth, performance, ease of use, and enterprise readiness.

Methodology

To surface the most relevant contenders, we scored products across seven criteria:

  • Feature Set & Capabilities – algorithm breadth, AutoML, MLOps
  • Ease of Use – GUI quality, API ergonomics, learning curve
  • Pricing & Value – free-tier generosity, total cost of ownership
  • Support & Community – documentation, forums, commercial SLAs
  • Integrations – language bindings, data-source connectors, cloud hooks
  • Performance & Reliability – scalability, training speed, production uptime
  • Ecosystem Momentum – plugin marketplace, research citations, adoption trends

Scores were compiled from official documentation, 2025 industry benchmarks, and verified customer reviews on G2, Capterra, and Reddit’s r/MachineLearning.

1. scikit-learn

Why it tops the list

The de-facto Python standard for classical ML, scikit-learn offers 100+ well-maintained algorithms, robust preprocessing, and seamless Pandas/Numpy integration. New in 2025: scikit-learn-2.0 adds GPU-accelerated pipelines via CuPy and automatic data-type conversion, cutting training time by up to 70% on large tabular sets.

Ideal use cases

  • Academic research and rapid prototyping
  • Production micro-services where low latency matters
  • Feature engineering in Python-first data stacks

2. TensorFlow & Keras

Deep-learning powerhouse

Google’s TensorFlow remains the most popular open-source deep-learning framework, and the 2025 TF 3.1 release streamlines distributed training with built-in Parameter-Server MirroredStrategy. The high-level Keras API keeps onboarding smooth while the tf.data pipeline delivers end-to-end production workflows.

3. H2O.ai (H2O-3 & Driverless AI)

Automated machine learning at enterprise scale

H2O-3’s open-source engine plus the commercial Driverless AI 6.0 bring one-click AutoML, model interpretability, and time-series forecasting. 2025’s update introduces generative-AI feature engineering and hybrid GPU/CPU scoring.

4. KNIME Analytics Platform

KNIME’s drag-and-drop interface and 2,000+ node extensions make it a favorite for citizen data scientists. The 2025 LTS adds native Snowflake push-down and Apache Arrow in-memory execution for faster ETL.

5. RapidMiner AI Hub

RapidMiner evolved into a full MLOps suite with Git-based versioning, model governance, and no-code AutoModel. Version 10.5 (Feb 2025) integrates with Databricks Unity Catalog for secure lakehouse training.

6. Orange Data Mining

Orange shines in education thanks to its visual programming canvas and instant widgets for clustering, text mining, and shiny dashboards. The 2025 release bundles a new Explainable AI add-on.

7. IBM SPSS Modeler 18.6

SPSS Modeler keeps its legacy of point-and-click predictive modeling, now with AutoML, governance, and direct Watson Studio integration. Best for regulated industries needing audit trails.

8. Amazon SageMaker Studio

Part of AWS’s fully managed ML stack, SageMaker Studio covers everything from labeling to deployment and recently launched JumpStart Code Assist, a GenAI pair-programmer for notebooks.

9. Google Vertex AI

Vertex AI unifies data engineering, experimentation, and model serving on GCP. The 2025 roadmap features a native Foundation Model Garden hosting open-source LLMs with adjustable context windows.

10. MATLAB Machine Learning Toolbox R2025a

MATLAB’s toolbox targets engineers who live in the MATLAB IDE. The new L2AEC feature automatically converts classic scripts into deployable Python packages.

Conclusion & Recommendations

If you need a lightweight, code-centric upgrade from Weka, scikit-learn or TensorFlow are compelling. Enterprises that prioritize AutoML and explainability should trial H2O.ai, while non-programmers may prefer the visual pipelines of KNIME or RapidMiner. Evaluate ecosystem fit—Python, cloud provider, governance needs—before committing. And remember: modern SQL-first analytics workflows often integrate with ML via tools like galaxy.io" target="_blank" id="">galaxy.io" target="_blank" id="">Galaxy, so consider the complete data lifecycle when picking your next platform.

Frequently Asked Questions (FAQs)

Is Weka still relevant in 2025?

Weka remains a solid educational tool with a friendly GUI, but it lacks native deep-learning support, large-scale cloud training, and modern AutoML found in newer platforms. Many teams therefore migrate to alternatives for performance and production needs.

Which Weka alternative is best for deep learning?

Tutorial writers and enterprises alike favor TensorFlow 3.1 for its combination of Keras simplicity and advanced distributed-training strategies. PyTorch is another option but fell outside our top-10 scope because of integration gaps with AutoML in 2025.

Can I move Weka workflows to Python easily?

Yes. scikit-learn mirrors many of Weka’s classical algorithms, and the liac-arff Python package lets you import ARFF files directly. From there you can build pipelines, cross-validation schemes, and persist models with joblib.

How does Galaxy relate to machine-learning pipelines?

Although Galaxy is primarily a modern SQL editor, its context-aware AI copilot and collaboration features streamline the data-exploration phase that precedes model training. By producing clean, reusable SQL, Galaxy shortens the path to feature generation before handing datasets off to ML frameworks like scikit-learn or TensorFlow.

Start Vibe Querying with Galaxy Today!
Welcome to the Galaxy, Guardian!
You'll be receiving a confirmation email

Follow us on twitter :)
Oops! Something went wrong while submitting the form.

Check out our other posts!

Trusted by top engineers on high-velocity teams
Aryeo Logo
Assort Health
Curri
Rubie Logo
Bauhealth Logo
Truvideo Logo